# library size
spe spe, metric = "sum", direction = "lower", log = TRUE)
# unique genes...spe spe, metric = "detected", direction = "lower", log = TRUE)
# mitochondrial percent...spe spe, metric = "subsets_mito_percent",
direction = "higher...# spot plot of log-transformed library size
p1 <-
plotCoords(spe, annotate="sum_log") +
ggtitle..., annotate = "detected_log") +
ggtitle("log2(Detected)")
p4 <-
plotObsQC(spe, plot_type = "spot