首先是lefse的安装
由于lefse使用的环境比较早,建议使用conda虚拟环境的方式安装,可以省掉不少麻烦
conda create -n lefse python=2.7 python=2.7...#python这里选成2.7否则会卡住
环境安装完成后,进入环境安装lefse
source activate lefse
conda install lefse
等lefse 自动安装完成以后...之后是改变颜色,这个比较简单
进入envs目录,然后找到 lefse-plot_cladogram.py 打开,最前面有一段
colors = ['r','g','b','m','c',[1.0,0.5,0.0...],[0.0,1.0,0.0],[0.33,0.125,0.0],[0.75,0.75,0.75],'k']
dark_colors = [[0.4,0.0,0.0],[0.0,0.2,0.0],[0.0,0.0,0.4...],'m','c',[1.0,0.5,0.0],[0.0,1.0,0.0],[0.33,0.125,0.0],[0.75,0.75,0.75],'k']
然后直接改这边的颜色就行
上下对应都要改。