DMU在windows下安装测试—外篇1

邓飞

发布于 2019-06-13 20:38:13

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发布于 2019-06-13 20:38:13

文章被收录于专栏：育种数据分析之放飞自我

DMU在windows下安装测试—外篇1

1. 下载地址

下载地址:http://dmu.agrsci.dk/

64为电脑安装DMUv6-R5-2-EM64T.msi, 32为电脑安装DMUv6-R5-2.msi

2. 安装DMU

3. 测试DMU是否安装成功

3.1 保存测试数据

#dir.create("d:/ddmu-test")setwd("d:/ddmu-test/")library(devtools)
install_github("dengfei2013/learnasreml")library(learnasreml)
data("animalmodel.dat")
data("animalmodel.ped")
dat = animalmodel.dat
ped = animalmodel.ped
dmuped = ped
dmuped$Birth = 2018library(data.table)# write.table(dat,"animal-model.txt",row.names = F,col.names = F)fwrite(dat,"animal-model.txt",sep = " ",col.names = F)
fwrite(dmuped,"animal-ped.txt",sep = " ",col.names = F)

3.2 查看数据

3.3 将下面内容保存为:Uni_animal.DIR

$COMMENT
Estimate variance components for BWT
Model
y: BWT
fixed: BYEAR + SEX
random: ANIMAL

$ANALYSE 1 1 0 0
$DATA  ASCII (4,2,0) d:/dmu-test/animal-model.txt
$VARIABLE
ANIMAL MOTHER BYEAR SEX
BWT TARSUS
$MODEL
1
0
1 0 3 3 4 1
1
0
0
$VAR_STR 1 PED 2 ASCII d:/dmu-test/animal-ped.txt
$PRIOR
1 1 1 0.3
2 1 1 0.7